白背飞虱酚氧化酶原PPO基因特性及其免疫应答

【目的】酚氧化酶（phenoloxidase,PO）是昆虫体内的免疫蛋白,在昆虫体内起重要的调节作用,主要以无活性的酚氧化酶原（prophenoloxidase,PPO）形式存在。本研究在转录组测序获得白背飞虱（Sogatella furcifera）3条PPO序列的基础上,通过分析白背飞虱体内不同SfPPO的发育和组织表达模式,并进一步抑制SfPPO的表达以及病原菌诱导,探讨SfPPO在白背飞虱体内的生物学功能。【方法】以白背飞虱3条SfPPO序列为研究对象,利用生物信息学方法分析其蛋白结构以及与其他昆虫之间的同源性。并以注射绿色荧光蛋白（green fluorescent protein,GFP）的dsRNA作为对照组,通过注射合成的dsSfPPO后采用实时荧光定量PCR（qRT-PCR）检测基因表达抑制效果;此外,为了探究SfPPO在白背飞虱生长发育和免疫应答方面的作用,利用qRT-PCR检测SfPPO在不同发育阶段及组织中的表达情况,以及注射大肠杆菌（Escherichia coli）和枯草芽孢杆菌（Bacillus subtilis）后3个SfPPO的诱导表达情况。【结果】SfPPO1、SfPPO2-1、SfPPO2-2的开放阅读框长度分别为2 079、999、2 070 bp,分别编码692、332、689个氨基酸,预测蛋白分子量分别为79.84、37.67、79.53 kD,等电点分别为6.43、9.56、6.20。生物信息学分析表明,白背飞虱的3个PPO蛋白具有较高的同源性,且与褐飞虱（Nilaparvata lugens）的亲缘关系最近;SfPPO1、SfPPO2-1、SfPPO2-2均在成虫第3天表达量最高,其中SfPPO2-1和SfPPO2-2的发育表达模式相似;SfPPO1和SfPPO2-1在表皮和脂肪体内表达量较高,而SfPPO2-2在翅和脂肪体内表达量较高,在头、足、中肠、马氏管中表达量相对较低;与注射dsGFP组相比,注射靶标基因的dsRNA后都能够显著沉默目的基因的表达,而且当SfPPO2-1表达被沉默后,SfPPO1出现显著高表达,说明不同的PPO之间可能具有补偿功能;大肠杆菌诱导后12 h,SfPPO2-1和SfPPO2-2表达量显著升高,SfPPO1表达量则在诱导24 h后显著升高;枯草芽胞杆菌诱导24 h后,SfPPO1、SfPPO2-1和SfPPO2-2表达量均显著升高。【结论】SfPPO1、SfPPO2-1、SfPPO2-2的表达存在组织和龄期特异性,且在不同菌诱导情况下存在免疫应答差异性。研究结果有助于更加全面、深入地探索白背飞虱酚氧化酶在调控昆虫发育及免疫中的潜在分子机理。     

Assessing the effects of vegetation and precipitation on soil erosion in the Three-River Headwaters Region of the Qinghai-Tibet Plateau,China

Soil erosion in the Three-River Headwaters Region (TRHR) of the Qinghai-Tibet Plateau in China has a significant impact on local economic development and ecological environment. Vegetation and precipitation are considered to be the main factors for the variation in soil erosion. However, it is a big challenge to analyze the impacts of precipitation and vegetation respectively as well as their combined effects on soil erosion from the pixel scale. To assess the influences of vegetation and precipitation on the variation of soil erosion from 2005 to 2015, we employed the Revised Universal Soil Loss Equation (RUSLE) model to evaluate soil erosion in the TRHR, and then developed a method using the Logarithmic Mean Divisia Index model (LMDI) which can exponentially decompose the influencing factors, to calculate the contribution values of the vegetation cover factor (C factor) and the rainfall erosivity factor (R factor) to the variation of soil erosion from the pixel scale. In general, soil erosion in the TRHR was alleviated from 2005 to 2015, of which about 54.95% of the area where soil erosion decreased was caused by the combined effects of the C factor and the R factor, and 41.31% was caused by the change in the R factor. There were relatively few areas with increased soil erosion modulus, of which 64.10% of the area where soil erosion increased was caused by the change in the C factor, and 23.88% was caused by the combined effects of the C factor and the R factor. Therefore, the combined effects of the C factor and the R factor were regarded as the main driving force for the decrease of soil erosion, while the C factor was the dominant factor for the increase of soil erosion. The area with decreased soil erosion caused by the C factor (12.10×10³ km²) was larger than the area with increased soil erosion caused by the C factor (8.30×10³ km²), which indicated that vegetation had a positive effect on soil erosion. This study generally put forward a new method for quantitative assessment of the impacts of the influencing factors on soil erosion, and also provided a scientific basis for the regional control of soil erosion.     

Mapping and validation of the quantitative trait loci for leaf stay‐green‐associated parameters in maize

Functional stay‐green is generally regarded as a desirable trait of varieties in major crops including maize. In this study, we used an F_3:4 recombinant inbred line population with 165 lines from a cross between a stay‐green inbred line (Zheng58) and a model inbred line (B73) using 211 polymorphic simple sequence repeat markers to map quantitative trait loci for three stay‐green‐associated parameters, chlorophyll content, photosystem II photochemical efficiency and stay‐green area, at maturity stage, detected a total of 23 quantitative trait loci (QTL) on nine chromosomes. Single QTL explained 3.7–13.5% of the phenotypic variance. Additionally, we validated some important stay‐green QTL using a heterogeneous inbred family approach and found that the stay‐green‐associated parameters were significantly correlated with the plant yield. This study may contribute to a better insight into the regulatory mechanism behind leaf stay‐green in maize and a novel development of elite maize varieties with delayed leaf senescence through molecular marker‐assisted selection.     

大鼠成熟的肺表面活性蛋白B的原核表达及纯化

为表达和纯化SP-B蛋白,先对SP-B基因进行稀有密码子优化,PCR反应获得SP-B片段,构建重组质粒pGEX4T-1/SP-B,转化到E.coli BL21(DE3)中诱导表达;用SDS-PAGE与Western blot进行检测;用GSTPrep FF 16/10对融合蛋白进行纯化。经双酶切鉴定证实质粒中插入基因长250bp,测序结果与大鼠SP-B cDNA序列相符;质粒转化后用IPTG进行诱导,在分子质量约34ku处出现1个新条带,与pGEX4T-1/SP-B蛋白预期大小一致,且该融合蛋白能可溶性表达并被纯化。结果表明成功构建了pGEX4T-1/SP-B重组质粒,表达、纯化得到GST/SP-B蛋白,为研究肺表面活性物质替代药物奠定了基础。     

茶树小分子量热激蛋白基因CsHSP17.2的克隆与表达分析

[目的]进一步了解茶树小分子量热激蛋白基因CsHSP17.2在逆境胁迫条件下的分子生物学功能.[方法]利用RT-PCR技术从茶树‘迎霜’中克隆得到CsHSP1 7.2基因,运用生物信息学软件分析其核苷酸和编码蛋白,通过Real-timePCR分析其表达模式.[结果]该基因开放阅读框长度为453 bp,编码150个氨基酸,蛋白质相对分子质量为17.2×10a,理论等电点5.56;无信号肽位点,属于非分泌型蛋白;被定位于细胞质中.系统发育树分析表明,茶树CsHSP1 7.2与水稻(GenBank登录号:P27777)和花生(ABC41131)的进化关系较近,属于小分子量热激蛋白基因家族第Ⅰ亚族.qRT-PCR分析发现,茶树CsHSP17.2属于组成型基因;高温(38℃)处理1h能显著提高CsHSP17.2 mRNA的相对表达量(P＜0.05);干旱(100 g·L-1 PEG 6000)、高盐(200 mmol· L-1 NaCl)和外源脱落酸(200 mg· L-1 ABA)处理条件下,该基因的转录水平均出现不同程度的上调.[结论]克隆得到茶树‘迎霜’小分子量热激蛋白基因CsHSP17.2,其在花中表达量最高,且响应高温、干旱、高盐和外源脱落酸胁迫.     

菠萝酸性转化酶基因家族初步生物信息学及表达分析

酸性转化酶（acid invertase, AIN）在菠萝采后蔗糖降解过程中起着重要作用,基于菠萝全基因组数据库,预测菠萝AIN家族基因并进行生物信息学分析,解析其在采后菠萝不同贮藏温度下的表达变化情况,为阐明AIN基因在采后菠萝果实贮藏特性中的作用奠定基础。以水稻AIN家族基因为探针,在菠萝全基因组中鉴定到2个菠萝细胞壁酸性转化酶基因（cell wall acid invertase, CWIN）和2个液泡酸性转化酶基因（vacuolar acid invertase, VIN）,分别命名为AcCWIN1、AcCWIN2、AcVIN1、AcVIN2,设计编码区引物进行测序验证,并进行生物信息学分析。进化分析结果表明,AcCWIN1、AcCWIN2和AcVIN1、AcVIN2蛋白分别归于细胞壁酸性转化酶和液泡酸性转化酶2个进化支上,且均属于糖基水解酶家族GH32,基因结构、保守域和保守基序均一致。荧光定量分析结果表明,菠萝果肉中AcVIN1和AcVIN2在果实采后贮藏过程中表达量升高,且AcVIN1在发生黑心病的部位大量表达,而AcCWIN1和AcCWIN2在采后贮藏过程中表达量逐渐降低,且随着贮藏温度的升高其表达量降低,预示AcVIN1、AcVIN2较AcCWIN1、AcCWIN2在菠萝采后蔗糖降解和黑心病的发生方面发挥着更为重要的作用。     

实时荧光定量PCR技术的概述及应用

实时荧光定量PCR技术是在传统PCR技术上发展而来的,不仅能判断某一基因的有无,而且还能对其进行定量分析。由于该技术与常规PCR相比,能够进行实时监测、且自动化程度高而被广大研究者青睐。本文对实时荧光定量PCR的原理、数据分析、定量方法、分类以及应用进行了系统而详细地综述。     

基于镧系金属有机框架材料检测水体中酰胺类除草剂残留的可视化技术研究

研发水体中酰胺类农药残留简便快捷的检测技术，对评估农药造成的水体污染和提出相应的治理对策具有重要意义。以共掺杂镧系金属离子 (Eu3+ 和Tb3+) 作为配位金属离子，分别利用水热法和微波法制备了镧系金属有机框架材料 (lanthanide metal-organic frameworks, Ln-MOF)，对其结构和性质进行了表征，并采用所制备的Ln-MOF对水体中残留的5种常见酰胺类除草剂 (乙草胺、异丙草胺、丙草胺、敌草胺和异丙甲草胺) 进行了定性和定量分析。结果表明:与水热法相比，采用微波法制备的Ln-MOF样品呈蓬松的簇状、结晶度好，且具有更高的发光效率，故选择微波法制备Ln-MOF。农药残留检测试验结果表明，不同除草剂对Tb3+和Eu3+的发光会产生差别性猝灭，并使整体发射光发生变化，进而实现水体中农药的可视化检测。进一步研究发现，荧光强度比值I (Tb3+)/I (Eu3+) 与丙草胺浓度在0.1~1 mmoL/L范围时呈线性相关，线性相关系数R2 = 0.998，检测限 (LOD) 为0.08 mmoL/L。另外，该材料对于用湖水配制的除草剂溶液也具有一定的定性检测能力。本研究结果展现了Ln-MOF用于水体中酰胺类除草剂的定性、定量分析具有良好应用前景。     

Do active‐dispersing insects dominate the invertebrate fauna of rock pools in the wet–dry tropics,Kimberley, Australia?

1. Invertebrate assemblages of tropical freshwater rock pools (FRPs) are poorly known compared with temperate regions, where FRPs contain specialized, endemic taxa of high conservation value. Invertebrates were sampled from pristine FRPs in the Morgan River catchment in the Australian wet–dry tropics in the 2015 and 2016 wet seasons. Taxa were classified as either active or passive dispersers and by functional feeding groups. A range of physical variables were examined to identify associations with invertebrate assemblages.
2. Forty‐seven taxa were identified from FRPs; most were actively dispersing predatory insects, primarily Coleoptera and Hemiptera. Five adult insect species were found in most pools; other taxa were rare and scattered across FRPs. Two previously undescribed species of Spinicaudata were collected, but few crustacean taxa were recorded, and passively dispersing taxa were rare. Species accumulation curves indicated that had more pools been sampled, more taxa would have been collected in 2015, but in 2016 most species were collected.
3. There was no pattern in FRP assemblages related to any physical variable, but the assemblages in pools were correlated between sampling times. An opportunistic and mobile assemblage composed mostly of actively dispersing predatory insects may explain the absence of relationships with measured variables. Low hydrological stability in the wet–dry tropics may be associated with low taxon richness.
4. The dominance of actively dispersing insects is in contrast with FRP assemblages in temperate and arid regions. Studies of a wider range of FRPs from tropical regions are required to determine whether the fauna of these Kimberley FRPs are typical, and to fully describe short‐range endemic species across the Kimberley and elsewhere.
5. The FRPs have conservation value as habitat for endemic, specialist rock‐pool taxa, contributing to regional species pools. At present, a lack of knowledge of endemic FRP specialist species in tropical regions, including the Kimberley, impedes our ability to protect and conserve these species from disturbance.